FastQCFastQC Report
Mon 25 Mar 2013
88.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 88.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 30251399
Filtered Sequences 0
Sequence length 49
%GC 52

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1064850 3.520002496413472 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1055915 3.4904666723016673 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 941639 3.1127122418371465 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 515437 1.7038451676234874 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 515390 1.7036898029079581 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 506045 1.672798669575579 No Hit
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 390302 1.2901948766071942 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 363658 1.2021196110632768 No Hit
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 357721 1.1824940724228985 RNA PCR Primer, Index 1 (100% over 27bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 340414 1.1252834951533977 No Hit
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 318533 1.05295295599387 RNA PCR Primer, Index 1 (100% over 25bp)
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 248695 0.8220942112462304 RNA PCR Primer, Index 1 (100% over 25bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 238208 0.7874280458897124 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 216190 0.7146446351125778 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 209846 0.6936737041483603 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 201970 0.6676385445843347 RNA PCR Primer, Index 1 (100% over 28bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 168938 0.5584469002574063 RNA PCR Primer, Index 1 (100% over 33bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 167221 0.5527711296922169 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 166363 0.5499348972257448 RNA PCR Primer, Index 1 (100% over 29bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTC 164341 0.5432509088257373 RNA PCR Primer, Index 5 (97% over 35bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 156772 0.5182305783610206 RNA PCR Primer, Index 1 (100% over 27bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTCA 155869 0.5152455924435098 RNA PCR Primer, Index 3 (97% over 36bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 154781 0.5116490645606175 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 151662 0.5013387975875099 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 145024 0.47939601074317256 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 144299 0.47699942736532613 No Hit
CCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTCC 116006 0.3834731742489 RNA PCR Primer, Index 1 (100% over 27bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGTGGAATTCTCGGGTG 103058 0.34067184793668553 No Hit
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 98311 0.3249800116682207 RNA PCR Primer, Index 3 (100% over 34bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 91685 0.303076892410827 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 90052 0.29767879495424326 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 89832 0.29695155586027605 RNA PCR Primer, Index 1 (100% over 28bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 84906 0.2806680114199016 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 81551 0.26957761523690194 RNA PCR Primer, Index 1 (100% over 25bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 81062 0.2679611610689476 No Hit
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 78095 0.25815335019712643 RNA PCR Primer, Index 1 (100% over 24bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 77220 0.2552609219824842 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 74935 0.2477075523019613 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 74863 0.2474695467802993 No Hit
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 73024 0.24139048908118269 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 72949 0.24114256666278475 RNA PCR Primer, Index 1 (100% over 29bp)
TTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACTC 72386 0.2392814957086778 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 68613 0.22680934524714047 No Hit
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 67863 0.22433012106316141 RNA PCR Primer, Index 1 (100% over 25bp)
ACCGGGTGCTGTAGGCTTTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 66961 0.22134844077789595 RNA PCR Primer, Index 1 (100% over 31bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 59016 0.1950851925889444 RNA PCR Primer, Index 1 (100% over 27bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 56930 0.1881896437252373 No Hit
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 56637 0.18722109347736282 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATATGGAATTCTCGGGTGCC 56569 0.18699631048468204 No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATGGAATTCTCGGGTG 56002 0.1851220170015939 No Hit
CGCGCATGAATGGATGAACGAGATTCCCACTGTCCCTGGAATTCTCGGG 55965 0.18499970860851758 No Hit
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 51976 0.17181354158199427 RNA PCR Primer, Index 1 (100% over 25bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 50792 0.16789967300355266 No Hit
TATTGCACTTGTCCCGGCCTGTGGAATTCTCGGGTGCCAAGGAACTCCA 50686 0.1675492759855503 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 50151 0.1657807627343119 RNA PCR Primer, Index 1 (100% over 26bp)
GGCCGCCGGTGAAATACCACTACTTGGAATTCTCGGGTGCCAAGGAACT 50098 0.1656055642253107 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 49934 0.1650634405370806 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 49753 0.16446512110068034 RNA PCR Primer, Index 1 (100% over 26bp)
ATGAATGGATGAACGAGATTCCCACTGTCCCTGGAATTCTCGGGTGCCA 49707 0.1643130620173963 No Hit
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 48266 0.15954964595191118 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTTGGAATTCTCGGGTGCC 47333 0.15646549106704122 No Hit
AGTAAGGTCAGCTAATTAAGCTATCGGGCCCTGGAATTCTCGGGTGCCA 46958 0.15522587897505172 No Hit
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 45924 0.1518078552334059 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 43533 0.14390408853488065 RNA PCR Primer, Index 3 (100% over 34bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 41986 0.13879027545139316 RNA PCR Primer, Index 1 (100% over 26bp)
TTAATGCTAATCGTGATAGGGGTTTGGAATTCTCGGGTGCCAAGGAACT 41919 0.1385687980909577 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 41225 0.13627468931271575 RNA PCR Primer, Index 1 (100% over 26bp)
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTGGAATTCTCGGGTGCC 41154 0.13603998942329906 No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGATGGAATTCTCGGGTGC 39731 0.13133607473822947 No Hit
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 39369 0.1301394358654289 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 39309 0.1299410979307106 RNA PCR Primer, Index 1 (100% over 29bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGTGGAATTCTCGGGTGC 38725 0.12801060869945222 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCTGGAATTCTCGGGTGCCAA 38599 0.12759409903654373 No Hit
CCCCCCACTGCTAAATTTGACTGATGGAATTCTCGGGTGCCAAGGAACT 38447 0.1270916429352573 RNA PCR Primer, Index 1 (100% over 25bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 37291 0.12327033205968424 RNA PCR Primer, Index 3 (100% over 34bp)
CTTCTCACTACTGCACTTGACTATGGAATTCTCGGGTGCCAAGGAACTC 37017 0.12236458882447056 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 35332 0.11679459849113093 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 35297 0.11667890136254525 RNA PCR Primer, Index 1 (100% over 28bp)
CTTCTCACTACTGCACTTGACTAGTCTTGGAATTCTCGGGTGCCAAGGA 34675 0.11462279810596529 RNA PCR Primer, Index 1 (100% over 22bp)
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 34568 0.11426909545571759 RNA PCR Primer, Index 1 (100% over 28bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 34302 0.11338979727846636 No Hit
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 34040 0.11252372163019633 RNA PCR Primer, Index 1 (100% over 32bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC 33480 0.11067256757282531 No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGTGGAATTCTCGGGTGCCAAG 33209 0.10977674123434755 No Hit
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 33089 0.10938006536491088 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 32759 0.1082892067239601 RNA PCR Primer, Index 1 (100% over 31bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 32399 0.10709917911565014 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 31445 0.10394560595362878 RNA PCR Primer, Index 1 (100% over 25bp)
GCGGGCCGCCGGTGAAATACCACTACTTGGAATTCTCGGGTGCCAAGGA 31361 0.10366793284502314 RNA PCR Primer, Index 1 (100% over 22bp)
GAATACCGGGTGCTGTAGGCTTTGGAATTCTCGGGTGCCAAGGAACTCC 31145 0.10295391628003717 RNA PCR Primer, Index 1 (100% over 27bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 30984 0.102421709488543 RNA PCR Primer, Index 1 (100% over 32bp)
ATGAATGGATGAACGAGATTCCCACTGTCCCTATGGAATTCTCGGGTGC 30781 0.101750666142746 No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 30629 0.10124821004145958 RNA PCR Primer, Index 1 (100% over 26bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 30481 0.10075897646915437 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 30871695 30.004932 267.5944 26
TTCTC 31227335 27.39819 241.00131 28
ATTCT 30762475 27.178297 243.2935 27
GAATT 30975975 23.8175 212.24937 25
TCTCG 30620040 23.219284 208.17046 29
GCCAA 24724610 22.69002 250.98468 37
TGCCA 27131925 22.633665 228.04231 36
CCAAG 23881655 21.916431 250.91222 38
GGAAT 30752515 20.43657 183.2708 24
TGGAA 30364420 20.178658 183.17145 23
AACTC 18923370 20.09314 289.0451 44
CTCGG 30101935 19.72848 179.74438 30
GAACT 22905145 19.24072 228.69913 43
GTGCC 27031095 17.715883 179.35954 35
CAAGG 23242050 16.874033 198.52065 39
AAGGA 22983480 16.802515 199.99722 40
ACTCC 15523835 16.369457 286.71603 45
AGGAA 22201820 16.231068 199.69325 41
GGAAC 21624455 15.699637 197.6712 42
TCGGG 29968235 15.538152 142.18903 31
CGGGT 29787420 15.444401 141.96947 32
GGTGC 28940205 15.005131 142.0632 34
GGGTG 29712170 12.187413 112.462524 33
CTCCA 9603385 10.126504 105.71038 45
TTGGA 11948355 7.2177906 100.417595 22
TCCAG 7807830 6.5133524 46.124435 45
CCAGT 7659480 6.3895974 54.033447 7
CAGTC 5646275 4.710167 27.061552 45
ATGGA 6978290 4.6374183 46.678196 22
CTGGA 6251860 4.1259365 20.4698 23
AGTCA 4884455 4.103028 26.728422 44
TTATC 4570635 4.0381045 97.57571 5
GTGGA 7450850 3.8900754 24.546053 23
GTAGT 6409040 3.8715875 65.75057 5
TCACT 3890625 3.7552383 30.525705 45
TATCA 3747620 3.6424005 107.33032 6
GACTG 5066295 3.3435187 73.25682 11
GTCAC 3833540 3.1979692 26.539768 45
TCAGA 3801005 3.1929104 105.1019 8
CTTGG 4862360 2.916951 18.405422 21
TGATG 4783820 2.889821 66.99255 14
CAGAC 3069000 2.8164515 100.95352 9
CACTC 2623895 2.7668252 31.80878 45
ACTGA 3168115 2.6612718 93.03721 12
CCCCC 2316885 2.6505916 55.12272 1
TAGTG 4385665 2.6493025 37.102795 13
ATCAG 3127390 2.6270618 92.54765 7
CTGAT 3407050 2.6015708 84.53932 13
AGACT 3015590 2.5331483 92.62418 10
TTGAC 3291520 2.5133538 45.23892 17
TGACT 3224520 2.4621935 45.1527 18
GTTGA 3902600 2.3574917 59.59276 18
TGTTG 4228505 2.321944 59.904274 17
ACTTG 3009220 2.2977939 23.134386 7
AGGTA 3424125 2.2755003 72.74306 3
GGTAG 4338435 2.2650895 56.823677 4
CTTAT 2561240 2.2628264 97.29671 4
ACTGT 2943280 2.2474432 48.145153 18
AGTGG 4225300 2.206022 44.088207 14
AGCTT 2855490 2.180408 84.00424 2
TAGCT 2845035 2.1724246 83.988014 1
CCACT 2032130 2.142825 41.421055 5
TTTGG 3880030 2.1305907 40.255116 21
TAGTA 2675760 2.0573978 83.63174 6
AGAAC 2145665 1.9828115 60.382328 15
ACTCA 1865385 1.9806958 27.68157 45
GCTTA 2593630 1.9804559 84.118416 3
CCCAC 1715310 1.9760364 45.68018 4
AGATT 2514960 1.9337586 56.993885 10
AAGAA 2054585 1.9118668 61.183983 14
GTAGA 2849595 1.8936965 49.51117 8
AGTAG 2822615 1.8757675 71.7775 7
ATGTT 2657380 1.8573494 77.13891 16
AACTG 2158785 1.8134171 53.20111 17
GATGT 2964385 1.7907326 67.042564 15
CACGT 2144815 1.7892215 43.316208 23
TAGTT 2487295 1.7384702 62.15025 18
ATAGT 2256030 1.7346667 70.56676 17
GTGGT 3637310 1.7262408 37.876118 15
CCTGG 2619075 1.7165132 14.361269 31
TGTGG 3526450 1.6736276 17.996155 22
GTTAT 2388085 1.6691285 37.240067 18
GTATA 2132865 1.6399647 67.74462 15
TATAG 2130940 1.6384846 67.171936 16
TTGTA 2327770 1.626972 64.82516 13
ACTGG 2462305 1.6250067 17.294699 22
GCTAA 1924075 1.6162566 49.730427 10
AGTTG 2672455 1.6143829 39.119984 9
AAGCT 1911010 1.6052817 54.838566 1
TGTAT 2290840 1.60116 62.94531 14
CGTTC 2107840 1.5983826 38.921642 25
ATCAC 1500750 1.5935204 56.27124 21
ACGTT 2066555 1.5779895 39.24234 24
GTTGG 3309625 1.570724 29.183167 21
GATTG 2542730 1.5360184 45.63554 11
CACTG 1816745 1.5155429 32.87216 6
TAGAT 1962590 1.5090399 56.596104 9
ACTGC 1808500 1.5086648 32.557125 7
GATGG 2883490 1.5054653 30.908386 21
TCTCA 1547590 1.4937367 33.84033 25
CCCCA 1294865 1.4916841 46.138973 3
CACTT 1536380 1.4829168 28.810558 6
ATTGT 2116535 1.4793311 51.83648 12
CTGTG 2453515 1.4718745 21.888208 21
CGCCT 1773910 1.469575 42.193794 29
TGAGG 2814100 1.4692366 55.834137 1
GCCTG 2234285 1.4643259 17.023426 30
GAGGT 2781565 1.4522504 57.057117 2
TCCCG 1746315 1.4467143 21.165129 12
AGCTG 2175045 1.4354284 42.853 2
TCGCC 1719850 1.4247897 43.29852 28
CTGTT 2020495 1.4024383 42.668613 19
AATGG 2108075 1.40092 12.71548 29
TTGAA 1814745 1.3953618 50.089012 11
GCACT 1646765 1.3737441 25.508232 5
TTCCC 1425480 1.3663603 9.015212 6
GTTTG 2483940 1.3639737 37.469997 20
CGTGG 2623510 1.3602569 7.7327156 18
GCTGG 2619760 1.3583125 23.506157 2
CTGCC 1631525 1.3516178 54.06051 4
GAAGA 1822125 1.3320996 47.95248 13
TAAAT 1336160 1.3076897 38.27416 12
AAATT 1328260 1.299958 38.688007 13
AGTTT 1858380 1.2988964 41.278564 19
CTAAA 1207680 1.2912645 41.477406 11
CACTA 1212400 1.2873459 20.814758 6
CAGTT 1672415 1.2770302 49.44993 8
TGAAG 1890325 1.2562145 43.608276 12
GCCAG 1734235 1.2503694 47.107582 6
AATTT 1403485 1.2485985 35.106686 14
GCTGT 2080045 1.2478282 14.683937 11
TGTAG 2063250 1.2463729 32.900085 11
CATTC 1275370 1.2309895 23.134226 3
ACCAC 1049745 1.217728 10.938501 2
CTCAT 1257245 1.2134951 14.414282 45
TGGTT 2207020 1.2119123 32.968075 16
ATGAA 1430545 1.2100514 6.884662 9
ATTTG 1683220 1.17647 27.50946 15
ATACC 1103530 1.1717459 8.917569 19
CTACT 1201960 1.160134 18.927776 8
TCCGT 1500285 1.1376714 40.216652 4
ACTAC 1069035 1.1351186 20.624172 7
GGTTA 1875835 1.1331588 36.49773 17
TTTCC 1285425 1.1278042 45.82725 2
TGCAC 1348840 1.1252129 25.61289 4
TTCCG 1469925 1.1146493 40.224342 3
CTGCT 1459405 1.1066719 29.654457 8
TTCAA 1131780 1.1000038 23.91859 1
GCTTG 1828525 1.0969403 17.04567 20
GGCTG 2110530 1.0942832 23.203617 1
TCTGA 1420305 1.0845228 5.555355 18
GGCTT 1806555 1.0837604 17.755163 19
CCGTG 1650230 1.0815427 6.481649 9
CCGTA 1276155 1.0645785 44.21489 5
GCTGC 1588520 1.0410987 42.569897 3
TCCGA 1246005 1.039427 38.919075 7
ATTCA 1065975 1.0360463 23.06918 4
GACTT 1356495 1.0357987 12.046893 21
CCTTG 1364200 1.0344777 19.587059 31
AGGCT 1559460 1.029171 16.422886 18
TTTGA 1466350 1.0248909 27.382988 16
TCACG 1226390 1.0230641 43.37301 22
ATCTC 1058380 1.0215503 34.040726 24
AATCC 946240 1.0047328 21.95159 8
TTGAT 1432135 1.0009767 35.461716 19
TGCTA 1295075 0.98889935 29.53414 9
CCCGT 1190240 0.9860404 7.9102073 8
GGTGG 2339990 0.9598231 9.343614 6
TTCGC 1263755 0.9583099 39.61434 27
AACAT 885075 0.9463318 25.336042 1
CCGAA 1029955 0.9451999 34.0852 8
CCTGT 1245780 0.94467926 18.030283 18
CAGTG 1417335 0.9353751 14.355552 5
GTTCC 1232670 0.93473804 7.6379733 15
CTCAA 877975 0.93224794 34.89961 26
GTTCG 1546855 0.92796516 30.796217 26
CCCTG 1109335 0.91901565 7.103834 2
CCCGG 1273240 0.9116467 18.36385 13
GTTTC 1307340 0.9074328 36.14644 1
CTGGT 1500700 0.9002766 27.568592 3
TGAGT 1480845 0.89455223 21.76439 18
TCCCA 847130 0.8932752 12.246227 9
AGAAT 1046445 0.88515383 15.29827 20
CGTAG 1338540 0.88337404 35.12404 6
TGGTC 1462810 0.87754613 27.910475 4
GTCCG 1326015 0.86905575 30.99823 6
TACCA 814080 0.8644032 9.529523 23
GACCT 1032910 0.86166155 13.325925 4
AGTTA 1120050 0.8612091 27.443499 20
TATGG 1424055 0.8602464 9.6259165 22
CTGTC 1126530 0.8542517 18.33953 12
GGTCC 1299895 0.85193706 30.813524 5
TCATT 960315 0.8484274 9.611183 45
AGTGA 1275280 0.8474866 23.954313 16
GTCCC 1020620 0.84552073 20.97376 11
TGAAC 1004945 0.8441713 5.3644347 10
CCCAA 723490 0.83926463 15.455551 10
CTGTA 1095355 0.8363962 8.37603 19
ATTGG 1384060 0.83608615 9.304056 3
CGACC 916405 0.83517754 14.058954 3
TCAAT 855885 0.8318549 31.951881 27
CTTCT 947570 0.83137745 17.24887 1
AATAC 775920 0.8296221 8.236897 13
TGGTG 1740820 0.82618046 9.570942 5
CTCAC 783400 0.82607377 20.67987 4
AGGAT 1236965 0.8220245 16.560278 13
AAGGT 1227855 0.8159705 23.836248 11
TATCT 919400 0.81227946 31.312893 23
GAAGG 1411890 0.8109317 20.81611 10
TGCTG 1343500 0.8059716 6.973521 16
AACGC 876755 0.80460674 20.437744 8
AGTGT 1331060 0.8040699 31.94829 9
ACATT 827065 0.80384403 23.091843 2
CATTG 1036780 0.7916692 14.322706 2
GTGTA 1310140 0.7914324 32.213512 10
GAGTT 1306910 0.7894813 21.800056 19
GTGAG 1503345 0.78489375 18.83984 17
ACTAG 926410 0.77820057 14.073536 20
GAAAT 918475 0.77690816 6.5734015 11
GGCCT 1178180 0.7721664 16.879953 16
TCACA 726455 0.77136165 26.267166 2
ATTGC 1007645 0.7694221 23.639368 2
CAAGT 914855 0.7684941 20.736061 3
TGTCC 1010125 0.7659814 18.667692 10
TAGGC 1156900 0.76350003 16.134605 17
AAATA 706140 0.7602706 12.606308 12
TACTG 993750 0.7588121 14.95857 9
TAGAA 891370 0.7539809 15.26231 19
GATGA 1132790 0.752795 7.3421855 8
CAGGA 1031415 0.7488208 18.082941 12
AAGTA 879415 0.7438685 20.853605 4
TCCTT 846510 0.7427096 8.951383 11
TCAGT 970495 0.741055 19.280315 12
CGGCC 1032435 0.739229 18.251019 15
CTCAG 879120 0.73336875 12.920737 7
CCGGC 1012405 0.72488743 18.250536 14
CAACG 789500 0.72453195 19.351992 7
CGAAG 993880 0.7215699 26.21557 9
TTGCA 935955 0.71468085 23.630463 3
TCGGT 1173950 0.7042578 14.388347 15
AGTAA 827265 0.6997566 20.794209 5
GCCTT 920180 0.6977758 19.857967 30
CGGTG 1340210 0.6948819 12.527687 16
CGCTG 1053885 0.6907047 14.058142 10
CTTGA 903795 0.69012386 15.257003 16
TGAAA 813450 0.68807083 7.5593157 10
CCAGG 952275 0.6865825 15.095903 11
GTGCT 1135325 0.6810864 6.9897466 15
ATCCC 645800 0.68097836 18.003496 8
CAGAA 735675 0.67983806 13.048937 15
GACTA 808770 0.6793809 16.932268 19
TGGCT 1132145 0.6791787 12.802415 8
CCAAA 574865 0.67150056 13.45184 11
CCACG 730710 0.665942 8.543563 1
GCCCA 725120 0.6608475 7.497482 11
CAAAG 708395 0.65462863 12.018603 1
CCGCC 719165 0.6508874 7.7554708 3
GTAAT 843355 0.6484576 19.032722 6
AAAGA 685595 0.63797134 9.700496 2
GTCGG 1227120 0.63624626 12.69894 14
CACCA 545960 0.63332593 10.138704 1
GTAGG 1208075 0.6307338 11.266099 8
CCGGG 1111070 0.62935656 5.894087 2
TCAAC 591665 0.62823945 22.659004 6
TAATC 645440 0.62731844 20.106524 7
CATGA 733395 0.6160646 5.4706206 5
TCCCT 641865 0.61524445 7.7155795 1
ATAGG 924020 0.614057 20.851616 16
ACCTC 582295 0.6140141 16.889706 5
CAATG 729520 0.61280954 15.719092 28
GGTGA 1169145 0.61040854 10.956155 17
GGCTA 917815 0.60571516 13.650607 9
GATTC 786925 0.6008838 5.883335 22
TTGTC 865525 0.6007663 20.647522 9
CTAGT 786145 0.60028815 12.264501 21
CTTGT 863480 0.5993468 20.65564 8
GATAG 888695 0.59058183 19.084818 15
ACAGT 702005 0.58969647 17.46331 4
CTAAG 701055 0.5888984 17.291952 11
TATTG 840700 0.587599 17.998943 1
GGACT 886755 0.585217 9.835301 4
TAAGT 751035 0.57747257 15.9318 12
AAGCA 624615 0.5772074 10.94274 15
AGCAG 792550 0.57540166 8.647504 16
ATCCA 535925 0.56905377 21.804945 9
TTTTG 894700 0.5684421 6.7414412 14
CACAG 618655 0.56774586 19.854507 3
TCAAG 669875 0.56270665 20.632578 2
GGATA 832585 0.5532939 16.351965 14
CTGCA 662400 0.5525793 16.33307 11
GCGAC 765645 0.55202377 10.968628 2
AAAGC 595065 0.54990023 10.823848 14
GTGGC 1059130 0.54914546 11.964646 7
TGGTA 903720 0.54592127 11.451924 16
GATCA 647340 0.5437769 12.723908 11
ACCCT 514680 0.5427159 6.9358068 21
GCATT 710160 0.5422672 14.223413 1
CTCGC 651590 0.5398021 14.375056 26
CAGAT 630425 0.529568 12.929853 9
TTCAC 548640 0.52954835 20.118282 1
CCTCA 500630 0.5279005 16.246002 6
TTGTG 944515 0.5186493 6.552861 13
AGCTC 611115 0.5097969 6.701011 9
GACCC 558610 0.50909644 10.259754 24
GGGCT 978375 0.5072751 5.4341846 18
AGAAA 542650 0.50495577 5.470106 11
CGCCG 703345 0.5035988 6.142234 4
AAAAG 534510 0.49738118 11.164793 13
ACCGG 689575 0.49717805 6.520213 1
AAGTT 640955 0.4928318 14.000683 13
CCATA 461555 0.4900865 6.1261325 2
AGGTT 806790 0.4873676 12.434088 10
CGGAA 668335 0.4852199 8.643402 4
GAATC 576395 0.48418185 9.971592 6
TTCAG 631580 0.48226473 13.705137 11
CAAAA 409600 0.48178634 14.172015 12
CCGAT 577010 0.48134622 8.063429 8
AAACA 407790 0.47965735 12.362574 4
ACGCT 572840 0.47786757 17.705618 9
CTCCT 498150 0.47748986 9.782522 10
GGTTC 795715 0.47735295 10.962318 9
ACGGA 651030 0.4726563 9.3323965 3
AGAGC 649480 0.47153097 6.7654877 11
TAGGT 780155 0.47127783 12.302968 9
CCCGC 519100 0.4698166 8.358559 26
AAAGT 551455 0.46645787 5.11774 6
AGATC 554935 0.46615508 12.702557 10
TCTCC 486090 0.46593007 9.960175 9
GTGAA 699040 0.4645466 5.189454 9
AGACC 503475 0.46204397 8.256225 4
ACCCG 504360 0.45965502 10.040603 25
GCAGC 633715 0.45690334 8.3322735 17
CAGCT 547435 0.45667455 10.372653 18
GGTTG 959690 0.45546192 9.848915 11
AATTG 592260 0.4553901 6.843467 29
GTAAA 534735 0.4523149 8.950217 2
ACATC 421665 0.4477307 11.199698 6
GTTCA 584250 0.44612432 13.845459 10
GTCAG 673960 0.4447822 9.422422 13
CGATG 671255 0.44299698 6.9201565 9
CTTTT 551400 0.4428295 8.356863 13
GCCGG 768250 0.43516895 5.054256 5
CCACC 373245 0.4299781 5.515794 14
GTTGT 778025 0.4272268 9.127813 12
AGACG 583015 0.4232765 10.71753 15
AGCTA 501780 0.42150396 6.3483515 1
GGGTT 886680 0.42081186 5.204481 19
GCCGC 586825 0.42016986 5.771461 2
AGAAG 572370 0.4184421 10.332225 16
CCCCG 457500 0.41406488 5.307924 10
CTAGA 488715 0.4105291 7.1754704 2
TGGAC 615190 0.4059967 9.589715 3
CGCGA 560470 0.40409434 11.101176 1
ACGTG 611890 0.4038189 8.95455 17
AGCAT 479580 0.40285558 5.299818 23
AGCCC 438135 0.3993 8.076372 10
GCCCG 555385 0.39765868 5.0072365 1
TTGGT 723975 0.39754704 8.608019 4
TAAAC 371050 0.3967307 11.431588 3
TGTCG 658935 0.39529803 14.299914 13
CCTTT 449290 0.39419734 8.971117 12
TGTAA 512120 0.39377028 8.139682 1
AGTTC 513140 0.39182577 12.651324 14
AAGGC 527735 0.38314253 6.772142 18
CCCAT 362470 0.3822146 5.910971 1
TTTGT 592765 0.3766096 9.325004 12
TGGGT 787840 0.3739031 5.0525928 18
TAATT 419900 0.37356046 5.3309584 13
CGACT 444920 0.3711557 5.7851634 13
CCGGT 561800 0.36819756 5.0210705 6
CATCT 381455 0.36818108 5.181068 6
CTAAT 378785 0.3681501 5.336293 12
GAGAG 640395 0.36781663 5.5685325 10
AGCAC 395775 0.36320662 5.0537214 15
GCTCA 426305 0.35562697 6.503619 10
GACGT 535015 0.35308498 9.706119 16
CCAGA 383000 0.3514829 8.185528 25
GCTAC 413105 0.34461543 6.3124943 2
CAGCA 373015 0.34231955 6.1879826 4
TGGCG 651550 0.33782044 6.3347297 20
ACCAG 367415 0.3371804 8.394853 24
TTATG 482070 0.33693808 6.0708165 21
TCCCC 319900 0.33499277 5.945685 9
CCCGA 364240 0.33195484 5.3073764 11
CAATT 341170 0.3315912 10.780919 28
CATCC 314090 0.3311993 10.900953 7
AACGG 455780 0.33090225 9.123611 2
CTACA 311310 0.33055398 7.9188323 3
TAGAC 391345 0.3287366 7.1528964 3
TGGAG 622870 0.3251993 7.620376 9
AAGAT 378555 0.3202074 7.037186 16
TACCC 300410 0.31677407 7.00896 20
GAGTC 479600 0.31651366 9.437712 11
CCGAC 346650 0.315924 5.4143815 12
GGAGT 594505 0.31039006 7.5931325 10
TGTTT 487150 0.3095077 5.5092254 19
CACCC 267740 0.3084364 5.433137 15
CCGCT 372140 0.30829504 7.6489778 27
CTAGC 349915 0.29190183 6.79633 8
TACAT 297880 0.2895166 7.1936965 4
ATAAA 262490 0.2826117 6.085434 4
TGGGC 542630 0.28134677 5.545676 17
CATAG 323540 0.27177924 6.019794 16
ATGGT 442460 0.26728225 5.7553434 11
GGCGA 462840 0.2639978 6.766013 21
TTACC 265030 0.25580743 8.73225 22
AGATA 301585 0.25510094 6.411988 17
CATAA 237435 0.25386807 6.0662274 3
TTGGG 513430 0.24367015 5.1596637 16
ACCTA 227880 0.24196665 8.624154 6
ATTAA 242125 0.23696588 5.2999496 15
TAGCC 283680 0.23664807 6.7920136 9
GATAC 279895 0.23511669 5.800807 18
CTATC 237700 0.22942847 5.1107287 21
AATTA 226995 0.22215828 5.2189407 14
TGTGC 366570 0.21990697 6.837271 14
GTTAC 286940 0.21910295 7.0309324 21
CCTAG 255750 0.21334864 6.764994 7
CATAC 179810 0.19092515 5.065586 10
TAGCA 223030 0.18734908 5.123827 1